SenNet-wide integrated maps contain consolidated data for all datasets of a particular assay type and tissue, across all datasets, assay variants, and data providers. RNA-seq integrated maps are added as both raw and processed versions: 'raw' features gene expression count matrices from the SenNet RNA-seq pipeline, and 'processed' versions are the results of secondary analysis (normalization, filtering, dimensionality reduction, clustering) applied to the raw matrix.

Tissue TypeCreation TimeAssay TypeOrganismNumber of DatasetsTotal Raw CellsTotal Processed CellsNumber Processed Cell TypesRaw Integrated Map DownloadProcessed Integrated Map DownloadShiny App(All Versions)
Liver Feb. 25, 2026, 4:42 p.m. rna-seq human 2 22000 15802 150 Raw h5mu Processed h5mu Shiny App All versions of Liver
Lung (Left) Feb. 26, 2026, 5:45 p.m. rna-seq human 84 920088 703686 292 Raw h5mu Processed h5mu Shiny App All versions of Lung (Left)
Lung (Right) March 2, 2026, 4:28 p.m. rna-seq human 68 694312 288734 190 Raw h5mu Processed h5mu Shiny App All versions of Lung (Right)